CDS

Accession Number TCMCG051C19354
gbkey CDS
Protein Id XP_002308022.1
Location join(3511679..3511846,3511942..3512046,3512460..3512537,3513006..3513147,3513271..3513341,3513890..3513986,3514173..3514390,3514656..3514907)
Gene LOC7496126
GeneID 7496126
Organism Populus trichocarpa

Protein

Length 376aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_002307986.3
Definition short integuments 2, mitochondrial isoform X1 [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category S
Description Mitochondrial
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
KEGG_ko ko:K19828        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000313        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003924        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005740        [VIEW IN EMBL-EBI]
GO:0005743        [VIEW IN EMBL-EBI]
GO:0005759        [VIEW IN EMBL-EBI]
GO:0005761        [VIEW IN EMBL-EBI]
GO:0005840        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019866        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031966        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043576        [VIEW IN EMBL-EBI]
GO:0044057        [VIEW IN EMBL-EBI]
GO:0044065        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044429        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070129        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0098798        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCGTTCAGGGTTAAAGGGAATAGTAAAGAAAGGAATAGGAGAGATGGGTTTCAACGCAGGTGGTGGAGCCATTAACTGGTTCCCTGGCCACATGGCTGCTGCCACCCGCGCCATCCGAGACCGCCTGAAACTTGCCGACCTAGTCATAGAAGTCCGTGACTCTCGTATTCCATTATCGTCAACAAATGAAGACTTACAACCTCAACTTGCTGCAAAAAGACGTGTTATTGCTCTTAATAAGAAGGATTTGGCTAATCCTAATATTATGCATAAATGGATTCGTTATTTTGACTCGTGCAAGCAAGATTGCATTCCGATAAGTGCACACAGCAAGAGTTCTGTTCAGAAGCTTCTTGAAGTTGTGGAGTTCAAACTCAAGGAGGTGATATCGAGGGAACCTACTCTCCTTGTTATGGTGGTTGGTGTTCCTAATGTTGGGAAATCAGCTTTGATAAACTCAATCCATCAAATTGCATTGTCTCGCTTTGCTGTGCAGGGGAAAAAGAAACGAGCTACAGTGGGCCCTTTGCCTGGTGTAACTCAAGATATTGCAGGATACAAGATTGCTCATAAGCCTAGCATATACGTGCTGGACACCCCGGGCGTGTTGGTTCCCAGTATCCCAGATATTGAAACAGGATTAAAGTTATCTCTTGCAGGATCTGTGAAAGATTCTGTTGTAGGTGAGGAGCGTATTGCCCGATACTTACTAGCAGTTTTAAATACTCGAGGCACTCCACTTCACTGGAAACACTGGAATAACAGAAAAATGGATGGGATTCGATATGAATCTGAGGAAAAACACAAATATGATCCTAAAGATCTTCGGCCAAATATGAGGAAGCCACCTAGTGTGTCTGATGTGGTGTATGTTGAGAATCTTGTCACAGAAGTCCAATGTGCAATGTACAAAACACTGGCAGAATTCAATGGTAATGTGGAGGATGAGAATGATTTGGAGAATCTTATAGAGCAACAATTTGAGGTGCTGCAGAAGGCACTGAAGATACCTCATAAGGCATCCGAAGCTCGCTTGATGGTATCAAAGAAGTTTCTCACTCTTTTTAGGACAGGTAAACTTGGTTGTTTCATCCTTGATGATGTCCCTGAGACCAACACTGTATCATAA
Protein:  
MRSGLKGIVKKGIGEMGFNAGGGAINWFPGHMAAATRAIRDRLKLADLVIEVRDSRIPLSSTNEDLQPQLAAKRRVIALNKKDLANPNIMHKWIRYFDSCKQDCIPISAHSKSSVQKLLEVVEFKLKEVISREPTLLVMVVGVPNVGKSALINSIHQIALSRFAVQGKKKRATVGPLPGVTQDIAGYKIAHKPSIYVLDTPGVLVPSIPDIETGLKLSLAGSVKDSVVGEERIARYLLAVLNTRGTPLHWKHWNNRKMDGIRYESEEKHKYDPKDLRPNMRKPPSVSDVVYVENLVTEVQCAMYKTLAEFNGNVEDENDLENLIEQQFEVLQKALKIPHKASEARLMVSKKFLTLFRTGKLGCFILDDVPETNTVS